EnhancerDB
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  3. rs148518252[chr1:42219400]
Enhancers that have rs148518252[chr1:42219400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs148518252[chr1:42219400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42219386 42219402 SOX4 JASPAR yes 28417823
chr1 42219387 42219402 SOX21 JASPAR yes 28417824
chr1 42219387 42219403 SOX4 JASPAR yes 28417825
Genes associated with rs148518252[chr1:42219400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More