EnhancerDB
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  3. rs148540231[chr1:117009188]
Enhancers that have rs148540231[chr1:117009188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs148540231[chr1:117009188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117008441 117009188 ZNF274 GTRD no Bone Marrow (K562) 21332685
chr1 117008671 117009197 ZNF143 GTRD no Epithelial (MCF-7) 21332702
chr1 117008929 117009225 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21332714
chr1 117009023 117009359 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21332715
chr1 117009167 117009567 ZNF274 GTRD no Cervix (HeLa-S3) 21332716
chr1 117009171 117009493 ZNF274 GTRD no Blood (GM12878) 21332717
chr1 117009188 117009203 TFAP2C JASPAR yes 31809569
Genes associated with rs148540231[chr1:117009188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More