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- rs148657628[chr1:115974589]
Enhancers that have rs148657628[chr1:115974589]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
115966905 |
115976995 |
enh27090 |
|
|
Transcript factors that have rs148657628[chr1:115974589]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
115974521
|
115975181
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21331068
|
|
|
chr1
|
115974584
|
115974594
|
TBX21
|
JASPAR
|
yes
|
|
31735858
|
|
|
chr1
|
115974584
|
115975234
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21331069
|
|
|
chr1
|
115974585
|
115974602
|
RXRA
|
JASPAR
|
yes
|
|
31735859
|
|
|
chr1
|
115974589
|
115974602
|
ATF4
|
JASPAR
|
yes
|
|
31735860
|
|
Genes associated with rs148657628[chr1:115974589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
116242628
|
116311402
|
-
|
CASQ2
|
ENSG00000118729.10
|
116311402
|
268039
|
Esophagus
|
0.261912
|
1055
|
|
|
chr1
|
115312100
|
115323306
|
-
|
SIKE1
|
ENSG00000052723.7
|
115323306
|
651283
|
Ovary
|
0.305589
|
1049
|
|