EnhancerDB
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  3. rs149008540[chr17:48726946]
Enhancers that have rs149008540[chr17:48726946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48721505 48732375 enh81219
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Stomach Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs149008540[chr17:48726946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48725183 48727034 AR GTRD no Prostate (PC-3) 21769881
chr17 48725183 48727034 AR GTRD no Prostate (PC-3) 108271048
chr17 48726442 48727448 TCF7L2 GTRD no Colon (HCT116) 21769882
chr17 48726442 48727448 TCF7L2 GTRD no Colon (HCT116) 108271049
chr17 48726457 48727523 ZNF143 GTRD no Epithelial (MCF-7) 21769883
chr17 48726457 48727523 ZNF143 GTRD no Epithelial (MCF-7) 108271050
chr17 48726466 48727042 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108271051
chr17 48726511 48727384 ZNF143 GTRD no Epithelial (MCF-7) 21769884
chr17 48726511 48727384 ZNF143 GTRD no Epithelial (MCF-7) 108271052
chr17 48726524 48727400 TCF7L2 GTRD no Colon (HCT116) 21769885
chr17 48726524 48727400 TCF7L2 GTRD no Colon (HCT116) 108271053
chr17 48726597 48727344 TCF7L2 GTRD no Colon (HCT116) 21769886
chr17 48726597 48727344 TCF7L2 GTRD no Colon (HCT116) 108271055
chr17 48726622 48726946 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108271061
chr17 48726690 48727382 ZNF143 GTRD no Epithelial (MCF-7) 21769888
chr17 48726690 48727382 ZNF143 GTRD no Epithelial (MCF-7) 108271067
chr17 48726936 48726951 MEF2C JASPAR yes 54711342
chr17 48726941 48726962 ZNF263 JASPAR yes 54711343
chr17 48726944 48726965 ZNF263 JASPAR yes 54711344
chr17 48726945 48726966 ZNF263 JASPAR yes 54711345
Genes associated with rs149008540[chr17:48726946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More