EnhancerDB
  1. Home
  2. SNP
  3. rs149090382[chr1:200304722]
Enhancers that have rs149090382[chr1:200304722]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs149090382[chr1:200304722]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200304322 200305154 MEF2B GTRD no Blood (Karpas-422) 21363088
chr1 200304719 200304728 ZEB1 JASPAR yes 34435996
chr1 200304719 200304734 SCRT1 JASPAR yes 34435997
chr1 200304720 200304730 ID4 JASPAR yes 34435998
chr1 200304720 200304730 TCF3 JASPAR yes 34435999
chr1 200304720 200304730 TCF4 JASPAR yes 34436000
chr1 200304721 200304730 SNAI2 JASPAR yes 34436001
chr1 200304722 200304727 USF2 TRANSFAC yes 34436002
Genes associated with rs149090382[chr1:200304722], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More