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- rs149210833[chr19:3460020]
Enhancers that have rs149210833[chr19:3460020]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3455785 |
3462255 |
enh99535 |
|
|
Transcript factors that have rs149210833[chr19:3460020]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3455740
|
3460473
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367170
|
|
|
chr19
|
3455740
|
3460473
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367171
|
|
|
chr19
|
3456778
|
3460584
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367173
|
|
|
chr19
|
3456778
|
3460584
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367174
|
|
|
chr19
|
3457119
|
3460040
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367180
|
|
|
chr19
|
3457119
|
3460040
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367181
|
|
|
chr19
|
3457127
|
3460392
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367182
|
|
|
chr19
|
3457127
|
3460392
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367183
|
|
|
chr19
|
3457130
|
3460457
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367184
|
|
|
chr19
|
3457130
|
3460457
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367185
|
|
|
chr19
|
3457642
|
3460460
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367191
|
|
|
chr19
|
3457642
|
3460460
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367192
|
|
|
chr19
|
3458821
|
3460539
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367208
|
|
|
chr19
|
3458847
|
3460204
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108367210
|
|
|
chr19
|
3458858
|
3460413
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367211
|
|
|
chr19
|
3458897
|
3460408
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108367212
|
|
|
chr19
|
3458932
|
3460217
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108367214
|
|
|
chr19
|
3459048
|
3460165
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367224
|
|
|
chr19
|
3459076
|
3460086
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367227
|
|
|
chr19
|
3459089
|
3460066
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367228
|
|
|
chr19
|
3459144
|
3460121
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367229
|
|
|
chr19
|
3459218
|
3460035
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108367234
|
|
|
chr19
|
3460003
|
3460022
|
RFX2
|
JASPAR
|
yes
|
|
112133597
|
|
|
chr19
|
3460012
|
3460027
|
NR2C2
|
JASPAR
|
yes
|
|
112133598
|
|
|
chr19
|
3460015
|
3460027
|
INSM1
|
JASPAR
|
yes
|
|
112133600
|
|
|
chr19
|
3460016
|
3460037
|
REST
|
JASPAR
|
yes
|
|
112133601
|
|
Genes associated with rs149210833[chr19:3460020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |