EnhancerDB
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  3. rs149230489[chr1:165825427]
Enhancers that have rs149230489[chr1:165825427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165800587 165834795 enh699
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149230489[chr1:165825427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165825421 165825434 ELF1 JASPAR yes 32804351
chr1 165825422 165825432 ELK1 JASPAR yes 32804352
chr1 165825422 165825434 EHF JASPAR yes 32804353
chr1 165825422 165825434 ELF1 JASPAR yes 32804354
chr1 165825422 165825443 IRF1 JASPAR yes 32804355
chr1 165825424 165825433 ELK4 JASPAR yes 32804356
chr1 165825424 165825434 ELK3 JASPAR yes 32804357
chr1 165825424 165825434 ERG JASPAR yes 32804358
chr1 165825424 165825434 ETS1 JASPAR yes 32804359
chr1 165825424 165825434 ETV3 JASPAR yes 32804360
chr1 165825424 165825434 ETV6 JASPAR yes 32804361
chr1 165825424 165825434 FEV JASPAR yes 32804362
chr1 165825424 165825434 FLI1 JASPAR yes 32804363
chr1 165825424 165825435 ELK4 JASPAR yes 32804364
chr1 165825424 165825439 IRF9 JASPAR yes 32804365
chr1 165825425 165825433 FEV JASPAR yes 32804366
chr1 165825425 165825439 IRF7 JASPAR yes 32804367
chr1 165825426 165825432 ETS1 JASPAR yes 32804368
chr1 165825426 165825440 STAT1 JASPAR yes 32804369
chr1 165825426 165825441 PRDM1 JASPAR yes 32804370
chr1 165825426 165825441 STAT2 JASPAR yes 32804371
chr1 165825426 165825444 IRF2 JASPAR yes 32804372
chr1 165825427 165825439 IRF1 JASPAR yes 32804373
Genes associated with rs149230489[chr1:165825427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More