EnhancerDB
  1. Home
  2. SNP
  3. rs149240762[chr1:220549276]
Enhancers that have rs149240762[chr1:220549276]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs149240762[chr1:220549276]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220549266 220549280 GLIS3 JASPAR yes 35490117
chr1 220549275 220549279 LFA1 TRANSFAC yes 35490118
Genes associated with rs149240762[chr1:220549276], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More