EnhancerDB
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  3. rs149293927[chr1:201276018]
Enhancers that have rs149293927[chr1:201276018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201263092 201282279 enh12518
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Thyroid Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs149293927[chr1:201276018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201273925 201278373 ZNF274 GTRD no Cervix (HeLa-S3) 21363917
chr1 201273925 201278373 ZNF274 GTRD no Cervix (HeLa-S3) 107856105
chr1 201273925 201278373 ZNF274 GTRD no Cervix (HeLa-S3) 107856106
chr1 201276007 201276019 GLI2 JASPAR yes 34489113
Genes associated with rs149293927[chr1:201276018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More