EnhancerDB
  1. Home
  2. SNP
  3. rs149309881[chr19:2054294]
Enhancers that have rs149309881[chr19:2054294]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2053625 2070755 enh4956
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Heart
Transcript factors that have rs149309881[chr19:2054294]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2053517 2055175 TCF7L2 GTRD no Colon (HCT116) 21834138
chr19 2053764 2055850 TCF7L2 GTRD no Colon (HCT116) 21834139
chr19 2053835 2054380 ZNF274 GTRD no Cervix (HeLa-S3) 21834140
chr19 2053843 2055168 TCF7L2 GTRD no Colon (HCT116) 21834141
chr19 2053869 2054461 TCF7L2 GTRD no Colon (HCT116) 21834142
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 21834143
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356650
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356651
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356652
chr19 2054046 2054442 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21834144
chr19 2054112 2054733 TCF7L2 GTRD no Colon (HCT116) 21834145
Genes associated with rs149309881[chr19:2054294], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 1248552 1259142 + MIDN ENSG00000167470.8 1248552 795152 Spleen 0.249557 16739