EnhancerDB
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  3. rs149449906[chr1:172716222]
Enhancers that have rs149449906[chr1:172716222]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs149449906[chr1:172716222]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172715486 172716423 P63 GTRD no Skin (Keratinocyte) 107846008
chr1 172715508 172716453 P63 GTRD no Skin (Keratinocyte) 107846017
chr1 172715541 172716456 P63 GTRD no Skin (Keratinocyte) 107846035
chr1 172715658 172716400 P63 GTRD no Skin (Keratinocyte) 107846046
chr1 172716216 172716232 SRF JASPAR yes 33151053
chr1 172716220 172716224 H1TF2 TRANSFAC yes 33151054
chr1 172716220 172716224 NFE TRANSFAC yes 33151055
chr1 172716220 172716224 SRF TRANSFAC yes 33151056
Genes associated with rs149449906[chr1:172716222], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More