EnhancerDB
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  3. rs149550177[chr6:42340394]
Enhancers that have rs149550177[chr6:42340394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42330865 42350575 enh9115
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs149550177[chr6:42340394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42340392 42340406 EBF1 JASPAR yes 101713996
chr6 42340393 42340404 EBF1 JASPAR yes 101713997
chr6 42340394 42340405 EBF1 JASPAR yes 101713998
Genes associated with rs149550177[chr6:42340394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More