EnhancerDB
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  3. rs149601212[chr1:43478902]
Enhancers that have rs149601212[chr1:43478902]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs149601212[chr1:43478902]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43478892 43478906 GLIS2 JASPAR yes 28478192
chr1 43478892 43478906 GLIS3 JASPAR yes 28478193
chr1 43478901 43478905 LFA1 TRANSFAC yes 28478195
Genes associated with rs149601212[chr1:43478902], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More