EnhancerDB
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  3. rs149604254[chr1:54715178]
Enhancers that have rs149604254[chr1:54715178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54709082 54722240 enh42965
Prostate (PC-3) Brain (SK-N-SH) Bone (Osteoblast) Stomach Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs149604254[chr1:54715178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54714692 54716443 ZNF274 GTRD no Blood (GM12878) 107804418
chr1 54714798 54716707 ZNF274 GTRD no Blood (GM12878) 107804419
chr1 54714815 54717152 ZNF274 GTRD no Blood (GM12878) 107804420
chr1 54714885 54716758 ZNF274 GTRD no Cervix (HeLa-S3) 107804421
chr1 54714893 54716289 TCF7L2 GTRD no Colon (HCT116) 107804422
chr1 54714954 54717414 ZNF274 GTRD no Bone Marrow (K562) 107804423
chr1 54714956 54716293 ZNF274 GTRD no Bone Marrow (K562) 107804424
chr1 54714966 54716441 ZNF274 GTRD no Bone Marrow (K562) 107804425
chr1 54714995 54716785 ZNF274 GTRD no Bone Marrow (K562) 107804426
chr1 54715066 54716369 ZNF274 GTRD no Bone Marrow (K562) 107804427
chr1 54715077 54716926 ZNF274 GTRD no Bone Marrow (K562) 107804428
chr1 54715102 54716727 ZNF274 GTRD no Liver (HepG2) 107804429
chr1 54715123 54716582 ZNF274 GTRD no Liver (HepG2) 107804430
chr1 54715135 54716499 ZNF274 GTRD no Liver (HepG2) 107804431
chr1 54715135 54716555 ZBTB33 GTRD no Lung (A549) 107804432
chr1 54715137 54716078 ZNF274 GTRD no Bone Marrow (K562) 107804433
chr1 54715146 54717255 ZNF274 GTRD no Bone Marrow (K562) 107804434
chr1 54715147 54716653 ZNF143 GTRD no Epithelial (MCF-7) 107804435
chr1 54715155 54716492 TCF7L2 GTRD no Colon (HCT116) 107804436
chr1 54715176 54715180 LFA1 TRANSFAC yes 28964303
Genes associated with rs149604254[chr1:54715178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More