EnhancerDB
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  3. rs149648500[chr19:10354729]
Enhancers that have rs149648500[chr19:10354729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10331225 10355975 enh5000
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs149648500[chr19:10354729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10352200 10354827 TCF7L2 GTRD no Colon (HCT116) 21848622
chr19 10352200 10354827 TCF7L2 GTRD no Colon (HCT116) 108383131
chr19 10352289 10354784 TCF7L2 GTRD no Colon (HCT116) 21848625
chr19 10352289 10354784 TCF7L2 GTRD no Colon (HCT116) 108383134
chr19 10352326 10354808 TCF7L2 GTRD no Colon (HCT116) 21848630
chr19 10352326 10354808 TCF7L2 GTRD no Colon (HCT116) 108383139
chr19 10354719 10354734 MEF2C JASPAR yes 112416742
chr19 10354720 10354735 MEF2A JASPAR yes 112416743
chr19 10354721 10354733 MEF2A JASPAR yes 112416744
chr19 10354721 10354733 MEF2B JASPAR yes 112416745
chr19 10354721 10354733 MEF2D JASPAR yes 112416746
Genes associated with rs149648500[chr19:10354729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More