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- rs149654427[chr18:52409693]
Enhancers that have rs149654427[chr18:52409693]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr18 |
52399338 |
52412895 |
enh17719 |
|
|
Transcript factors that have rs149654427[chr18:52409693]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr18
|
52409448
|
52410431
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21823072
|
|
|
chr18
|
52409448
|
52410431
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108337255
|
|
|
chr18
|
52409483
|
52410371
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108337256
|
|
|
chr18
|
52409501
|
52410353
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21823073
|
|
|
chr18
|
52409501
|
52410353
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108337257
|
|
|
chr18
|
52409563
|
52410245
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108337258
|
|
|
chr18
|
52409595
|
52410313
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108337259
|
|
|
chr18
|
52409598
|
52410335
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108337260
|
|
|
chr18
|
52409603
|
52410092
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108337261
|
|
|
chr18
|
52409605
|
52410244
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108337262
|
|
|
chr18
|
52409612
|
52410183
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108337263
|
|
|
chr18
|
52409639
|
52410296
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108337264
|
|
|
chr18
|
52409645
|
52410162
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108337265
|
|
|
chr18
|
52409656
|
52410235
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108337266
|
|
|
chr18
|
52409658
|
52410263
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108337267
|
|
|
chr18
|
52409663
|
52410133
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108337268
|
|
|
chr18
|
52409677
|
52410061
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108337269
|
|
|
chr18
|
52409678
|
52410188
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108337270
|
|
|
chr18
|
52409686
|
52410426
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21823074
|
|
|
chr18
|
52409686
|
52410426
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108337271
|
|
|
chr18
|
52409689
|
52410269
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108337272
|
|
|
chr18
|
52409690
|
52409701
|
BATF
|
JASPAR
|
yes
|
|
110726226
|
|
Genes associated with rs149654427[chr18:52409693], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |