EnhancerDB
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  3. rs149767906[chr6:25405236]
Enhancers that have rs149767906[chr6:25405236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25402146 25419595 enh49068
Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Adrenal Thymus Stomach
chr6 25405177 25405324 vista51383
VISTA
Transcript factors that have rs149767906[chr6:25405236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25405124 25405380 SPI1 UCSC Txn Factor no Conserved 108539120
chr6 25405233 25405247 FOXF2 JASPAR yes 70337115
chr6 25405233 25405247 FOXF2 JASPAR yes 100856105
chr6 25405234 25405242 FOXG1 JASPAR yes 70337116
chr6 25405234 25405242 FOXG1 JASPAR yes 100856106
chr6 25405235 25405245 HOXC10 JASPAR yes 70337117
chr6 25405235 25405245 HOXD11 JASPAR yes 70337118
chr6 25405235 25405245 HOXC10 JASPAR yes 100856107
chr6 25405235 25405245 HOXD11 JASPAR yes 100856108
chr6 25405235 25405246 HOXA10 JASPAR yes 70337119
chr6 25405235 25405246 HOXC11 JASPAR yes 70337120
chr6 25405235 25405246 HOXC12 JASPAR yes 70337121
chr6 25405235 25405246 HOXD12 JASPAR yes 70337122
chr6 25405235 25405246 HOXA10 JASPAR yes 100856109
chr6 25405235 25405246 HOXC11 JASPAR yes 100856110
chr6 25405235 25405246 HOXC12 JASPAR yes 100856111
chr6 25405235 25405246 HOXD12 JASPAR yes 100856112
chr6 25405236 25405245 CDX1 JASPAR yes 70337123
chr6 25405236 25405245 CDX1 JASPAR yes 100856113
chr6 25405236 25405247 CDX2 JASPAR yes 70337124
chr6 25405236 25405247 CDX2 JASPAR yes 100856114
Genes associated with rs149767906[chr6:25405236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More