EnhancerDB
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  3. rs149844983[chr17:42610351]
Enhancers that have rs149844983[chr17:42610351]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42605385 42616132 enh17182
Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Breast Uterus
Transcript factors that have rs149844983[chr17:42610351]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42608322 42610375 ZNF274 GTRD no Cervix (HeLa-S3) 21762247
chr17 42608335 42610600 ZNF274 GTRD no Cervix (HeLa-S3) 21762249
chr17 42608429 42610606 ZNF274 GTRD no Cervix (HeLa-S3) 21762250
chr17 42608703 42610611 TCF7L2 GTRD no Colon (HCT116) 21762254
chr17 42608722 42610365 TCF7L2 GTRD no Colon (HCT116) 21762256
chr17 42608723 42610367 TCF7L2 GTRD no Colon (HCT116) 21762257
chr17 42608724 42610439 TCF7L2 GTRD no Colon (HCT116) 21762258
chr17 42608750 42610682 TCF7L2 GTRD no Colon (HCT116) 21762260
chr17 42608754 42610431 TCF7L2 GTRD no Colon (HCT116) 21762262
chr17 42608911 42610381 TCF7L2 GTRD no Colon (HCT116) 21762269
chr17 42610348 42610357 NKX2-8 JASPAR yes 54404390
Genes associated with rs149844983[chr17:42610351], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More