EnhancerDB
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  3. rs149865219[chr1:42129922]
Enhancers that have rs149865219[chr1:42129922]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149865219[chr1:42129922]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42129910 42129931 IRF1 JASPAR yes 28407099
chr1 42129913 42129927 SPI1 JASPAR yes 28407100
chr1 42129913 42129927 SPIC JASPAR yes 28407101
Genes associated with rs149865219[chr1:42129922], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More