EnhancerDB
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  3. rs149996108[chr17:77890553]
Enhancers that have rs149996108[chr17:77890553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs149996108[chr17:77890553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77889653 77891360 TCF7L2 GTRD no Colon (HCT116) 21796574
chr17 77889812 77890782 ZNF143 GTRD no Epithelial (MCF-7) 21796582
chr17 77889871 77890767 ZNF143 GTRD no Epithelial (MCF-7) 21796589
chr17 77889952 77890744 ZNF143 GTRD no Epithelial (MCF-7) 21796601
chr17 77889973 77890595 TCF7L2 GTRD no Colon (HCT116) 21796603
chr17 77890226 77890759 ZNF274 GTRD no Liver (HepG2) 21796617
chr17 77890255 77890790 ZNF143 GTRD no Epithelial (MCF-7) 21796618
chr17 77890256 77890759 ZNF143 GTRD no Epithelial (MCF-7) 21796619
chr17 77890311 77890748 ZNF143 GTRD no Epithelial (MCF-7) 21796620
chr17 77890342 77890633 ZNF274 GTRD no Cervix (HeLa-S3) 21796621
chr17 77890539 77890554 RUNX2 JASPAR yes 56228440
chr17 77890552 77890566 GATA2 JASPAR yes 56228444
Genes associated with rs149996108[chr17:77890553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More