EnhancerDB
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  3. rs150314249[chr1:172829509]
Enhancers that have rs150314249[chr1:172829509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172826285 172832604 enh27244
Skin (Keratinocyte) Prostate (PC-3) Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9)
Transcript factors that have rs150314249[chr1:172829509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172829502 172829513 NFIL3 JASPAR yes 33158034
chr1 172829503 172829515 DBP JASPAR yes 33158035
chr1 172829503 172829515 HLF JASPAR yes 33158036
chr1 172829503 172829515 TEF JASPAR yes 33158037
chr1 172829505 172829516 NFIL3 JASPAR yes 33158038
chr1 172829505 172829516 PHOX2A JASPAR yes 33158039
chr1 172829505 172829516 PROP1 JASPAR yes 33158040
chr1 172829506 172829518 MEF2A JASPAR yes 33158041
chr1 172829507 172829517 MEF2A JASPAR yes 33158042
chr1 172829508 172829512 TEAD2 TRANSFAC yes 33158043
chr1 172829508 172829518 ALX3 JASPAR yes 33158044
chr1 172829508 172829518 GSX1 JASPAR yes 33158045
chr1 172829508 172829518 MEOX1 JASPAR yes 33158046
chr1 172829508 172829525 ZNF410 JASPAR yes 33158047
chr1 172829509 172829517 LBX1 JASPAR yes 33158048
chr1 172829509 172829517 PDX1 JASPAR yes 33158049
chr1 172829509 172829517 VAX1 JASPAR yes 33158050
chr1 172829509 172829517 VAX2 JASPAR yes 33158051
chr1 172829509 172829517 VSX1 JASPAR yes 33158052
chr1 172829509 172829517 VSX2 JASPAR yes 33158053
chr1 172829509 172829519 POU6F2 JASPAR yes 33158054
Genes associated with rs150314249[chr1:172829509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More