EnhancerDB
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  3. rs150468842[chr12:109006966]
Enhancers that have rs150468842[chr12:109006966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs150468842[chr12:109006966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109006946 109006967 REST JASPAR yes 123606765
chr12 109006961 109006970 SNAI2 JASPAR yes 123606766
chr12 109006961 109006971 ID4 JASPAR yes 123606767
chr12 109006961 109006971 TCF3 JASPAR yes 123606768
chr12 109006961 109006971 TCF4 JASPAR yes 123606769
chr12 109006963 109006972 ZEB1 JASPAR yes 123606770
Genes associated with rs150468842[chr12:109006966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More