EnhancerDB
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  3. rs1540976[chr1:42420922]
Enhancers that have rs1540976[chr1:42420922]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42414541 42425761 enh26655
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs1540976[chr1:42420922]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42420915 42420935 RREB1 JASPAR yes 28441671
chr1 42420916 42420936 RREB1 JASPAR yes 28441672
chr1 42420921 42420931 SP1 JASPAR yes 28441673
Genes associated with rs1540976[chr1:42420922], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More