-
Home
- SNP
- rs1545272[chr17:2393947]
Enhancers that have rs1545272[chr17:2393947]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
2383605 |
2399907 |
enh32054 |
|
|
Transcript factors that have rs1545272[chr17:2393947]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
2391628
|
2397454
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21739610
|
|
|
chr17
|
2391628
|
2397454
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108230832
|
|
|
chr17
|
2392133
|
2397458
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21739611
|
|
|
chr17
|
2392133
|
2397458
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108230833
|
|
|
chr17
|
2393938
|
2393949
|
FOXP2
|
JASPAR
|
yes
|
|
52755697
|
|
|
chr17
|
2393940
|
2393960
|
TP53
|
JASPAR
|
yes
|
|
52755698
|
|
|
chr17
|
2393941
|
2393953
|
GRHL1
|
JASPAR
|
yes
|
|
52755699
|
|
|
chr17
|
2393942
|
2393958
|
SOX4
|
JASPAR
|
yes
|
|
52755700
|
|
|
chr17
|
2393947
|
2393951
|
H4TF2
|
TRANSFAC
|
yes
|
|
52755701
|
|
Genes associated with rs1545272[chr17:2393947], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |