EnhancerDB
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  3. rs1572249[chr10:29032117]
Enhancers that have rs1572249[chr10:29032117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29015445 29035235 enh27941
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Stomach Muscle (A673) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs1572249[chr10:29032117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29031872 29033052 ZNF143 GTRD no Epithelial (MCF-7) 21423461
chr10 29031887 29033156 ZNF143 GTRD no Epithelial (MCF-7) 21423462
chr10 29031902 29032891 ZNF143 GTRD no Epithelial (MCF-7) 21423463
chr10 29031931 29032879 ZNF143 GTRD no Epithelial (MCF-7) 21423464
chr10 29031941 29032970 ZNF143 GTRD no Epithelial (MCF-7) 21423465
chr10 29031960 29033064 ZNF143 GTRD no Epithelial (MCF-7) 21423466
chr10 29031966 29032832 ZNF143 GTRD no Epithelial (MCF-7) 21423467
chr10 29032000 29032860 ZNF143 GTRD no Epithelial (MCF-7) 21423468
chr10 29032001 29032772 ZNF143 GTRD no Epithelial (MCF-7) 21423469
chr10 29032003 29032758 ZNF143 GTRD no Epithelial (MCF-7) 21423470
chr10 29032005 29032890 ZNF143 GTRD no Epithelial (MCF-7) 21423471
chr10 29032029 29033133 ZNF143 GTRD no Epithelial (MCF-7) 21423472
chr10 29032064 29032640 ZNF274 GTRD no Cervix (HeLa-S3) 21423473
chr10 29032079 29032812 ZNF143 GTRD no Epithelial (MCF-7) 21423474
chr10 29032083 29032795 ZNF143 GTRD no Epithelial (MCF-7) 21423475
chr10 29032084 29032685 ZNF274 GTRD no Cervix (HeLa-S3) 21423476
chr10 29032084 29032919 ZNF143 GTRD no Epithelial (MCF-7) 21423477
chr10 29032104 29032784 ZNF143 GTRD no Epithelial (MCF-7) 21423478
chr10 29032112 29032123 RUNX1 JASPAR yes 126258328
chr10 29032112 29032636 ZNF274 GTRD no Cervix (HeLa-S3) 21423479
chr10 29032113 29032601 ZNF143 GTRD no Epithelial (MCF-7) 21423480
Genes associated with rs1572249[chr10:29032117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More