EnhancerDB
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  3. rs1574520[chr19:488607]
Enhancers that have rs1574520[chr19:488607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 488227 488667 vista28087
VISTA
Transcript factors that have rs1574520[chr19:488607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 487255 490021 ZNF274 GTRD no Bone Marrow (K562) 108343918
chr19 487329 489959 ZNF274 GTRD no Bone Marrow (K562) 108343920
chr19 487788 489358 ZNF274 GTRD no Bone Marrow (K562) 108343930
chr19 487819 489467 ZNF274 GTRD no Bone Marrow (K562) 108343935
chr19 487843 490102 TCF7L2 GTRD no Colon (HCT116) 108343937
chr19 487858 489871 ZNF143 GTRD no Epithelial (MCF-7) 108343938
chr19 487859 490278 ZNF274 GTRD no Bone Marrow (K562) 108343939
chr19 488015 490207 ZNF143 GTRD no Epithelial (MCF-7) 108343942
chr19 488179 490223 ZNF143 GTRD no Epithelial (MCF-7) 108343945
chr19 488233 490024 ZNF274 GTRD no Bone Marrow (K562) 108343947
chr19 488239 490203 ZNF274 GTRD no Blood (GM12878) 108343948
chr19 488240 490055 TCF7L2 GTRD no Colon (HCT116) 108343949
chr19 488242 489952 ZNF274 GTRD no Liver (HepG2) 108343950
chr19 488244 489704 ZNF274 GTRD no Bone Marrow (K562) 108343951
chr19 488274 490229 TCF7L2 GTRD no Colon (HCT116) 108343952
chr19 488363 489337 TCF7L2 GTRD no Colon (HCT116) 108343953
chr19 488376 488955 ZBTB33 GTRD no Lung (A549) 108343954
chr19 488381 490086 TCF7L2 GTRD no Colon (HCT116) 108343955
chr19 488385 489720 POLR2A UCSC Txn Factor no Conserved 108343956
chr19 488391 489902 ZBTB33 GTRD no Lung (A549) 108343957
chr19 488393 489848 TCF7L2 GTRD no Colon (HCT116) 108343958
chr19 488394 490006 ZBTB33 GTRD no Brain (SK-N-SH) 108343959
chr19 488400 489696 ZNF274 GTRD no Cervix (HeLa-S3) 108343960
chr19 488402 489915 ZBTB33 GTRD no Lung (A549) 108343961
chr19 488405 488909 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108343962
chr19 488405 489461 ZNF274 GTRD no Liver (HepG2) 108343963
chr19 488405 490025 ZNF274 GTRD no Blood (GM12878) 108343964
chr19 488406 489744 ZBTB33 GTRD no Lung (A549) 108343965
chr19 488409 489248 ZNF143 GTRD no Epithelial (MCF-7) 108343966
chr19 488412 489485 ZNF274 GTRD no Blood (GM12878) 108343967
chr19 488413 489375 ZNF274 GTRD no Blood (GM12878) 108343968
chr19 488413 489402 ZBTB33 GTRD no Lung (A549) 108343969
chr19 488414 489456 ZBTB33 GTRD no Lung (A549) 108343970
chr19 488414 490137 ZNF274 GTRD no Liver (HepG2) 108343971
chr19 488415 489396 ZNF274 GTRD no Cervix (HeLa-S3) 108343972
chr19 488417 490247 TCF7L2 GTRD no Colon (HCT116) 108343973
chr19 488418 489416 ZNF274 GTRD no Blood (GM12878) 108343974
chr19 488418 490030 ZNF274 GTRD no Bone Marrow (K562) 108343975
chr19 488418 490273 TCF7L2 GTRD no Colon (HCT116) 108343976
chr19 488419 489247 ZNF143 GTRD no Epithelial (MCF-7) 108343977
chr19 488420 489985 ZNF274 GTRD no Bone Marrow (K562) 108343978
chr19 488420 490108 ZNF274 GTRD no Bone Marrow (K562) 108343979
chr19 488422 489338 ZNF274 GTRD no Blood (GM12878) 108343980
chr19 488422 490061 ZNF274 GTRD no Blood (GM12878) 108343981
chr19 488422 490184 TCF7L2 GTRD no Colon (HCT116) 108343982
chr19 488423 490038 ZNF274 GTRD no Blood (GM12878) 108343983
chr19 488427 490250 TCF7L2 GTRD no Colon (HCT116) 108343984
chr19 488428 489328 ZNF274 GTRD no Blood (GM12878) 108343985
chr19 488428 489374 ZNF274 GTRD no Liver (HepG2) 108343986
chr19 488428 489518 ZNF274 GTRD no Bone Marrow (K562) 108343987
chr19 488429 489360 ZNF274 GTRD no Bone Marrow (K562) 108343988
chr19 488429 490151 ZNF274 GTRD no Liver (HepG2) 108343989
chr19 488430 489324 ZNF274 GTRD no Bone Marrow (K562) 108343990
chr19 488430 489481 ZNF143 GTRD no Epithelial (MCF-7) 108343991
chr19 488432 489322 ZNF274 GTRD no Bone Marrow (K562) 108343992
chr19 488432 489426 ZNF274 GTRD no Blood (GM12878) 108343993
chr19 488432 489997 ZNF274 GTRD no Bone Marrow (K562) 108343994
chr19 488433 489970 ZBTB33 GTRD no Brain (SK-N-SH) 108343995
chr19 488433 490158 ZNF274 GTRD no Bone Marrow (K562) 108343996
chr19 488434 489670 ZNF274 GTRD no Bone Marrow (K562) 108343997
chr19 488435 489456 ZNF274 GTRD no Blood (GM12878) 108343998
chr19 488435 489799 ZBTB33 GTRD no Lung (A549) 108343999
chr19 488435 489972 ZNF274 GTRD no Liver (HepG2) 108344000
chr19 488436 488700 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108344001
chr19 488436 489773 ZNF274 GTRD no Blood (GM12878) 108344002
chr19 488436 489818 ZBTB33 GTRD no Lung (A549) 108344003
chr19 488437 490133 ZNF274 GTRD no Liver (HepG2) 108344004
chr19 488437 490278 ZNF274 GTRD no Bone Marrow (K562) 108344005
chr19 488438 489382 ZBTB33 GTRD no Lung (A549) 108344006
chr19 488438 489396 ZNF274 GTRD no Liver (HepG2) 108344007
chr19 488438 489475 ZNF274 GTRD no Liver (HepG2) 108344008
chr19 488438 490044 ZNF274 GTRD no Liver (HepG2) 108344009
chr19 488438 490079 ZNF274 GTRD no Liver (HepG2) 108344010
chr19 488438 490086 ZNF274 GTRD no Blood (GM12878) 108344011
chr19 488440 488706 ZNF143 GTRD no Epithelial (MCF-7) 108344012
chr19 488440 489407 ZNF274 GTRD no Bone Marrow (K562) 108344013
chr19 488440 489439 ZNF143 GTRD no Epithelial (MCF-7) 108344014
chr19 488440 489578 ZNF274 GTRD no Bone Marrow (K562) 108344015
chr19 488441 488793 ZNF274 GTRD no Liver (HepG2) 108344016
chr19 488441 489345 ZNF274 GTRD no Blood (GM12878) 108344017
chr19 488442 489117 PHF8 UCSC Txn Factor no Conserved 108344018
chr19 488442 489117 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108344019
chr19 488442 489445 ZNF274 GTRD no Bone Marrow (K562) 108344020
chr19 488442 489952 ZNF143 GTRD no Epithelial (MCF-7) 108344021
chr19 488444 488792 ZNF274 GTRD no Blood (GM12878) 108344022
chr19 488444 489529 ZNF274 GTRD no Bone Marrow (K562) 108344023
chr19 488446 489396 ZNF274 GTRD no Blood (GM12878) 108344024
chr19 488447 488743 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108344025
chr19 488447 489918 ZNF274 GTRD no Liver (HepG2) 108344026
chr19 488448 489419 ZNF274 GTRD no Bone Marrow (K562) 108344027
chr19 488448 489466 ZBTB33 GTRD no Brain (SK-N-SH) 108344028
chr19 488448 489743 ZNF274 GTRD no Blood (GM12878) 108344029
chr19 488449 489950 ZNF274 GTRD no Bone Marrow (K562) 108344030
chr19 488449 490114 ZNF274 GTRD no Liver (HepG2) 108344031
chr19 488449 490174 ZNF274 GTRD no Liver (HepG2) 108344032
chr19 488450 488748 ZBTB33 GTRD no Brain (SK-N-SH) 108344033
chr19 488450 489317 ZBTB33 GTRD no Lung (A549) 108344034
chr19 488450 489967 ZNF274 GTRD no Bone Marrow (K562) 108344035
chr19 488453 488805 ZBTB33 GTRD no Brain (SK-N-SH) 108344036
chr19 488453 489343 ZBTB33 GTRD no Lung (A549) 108344037
chr19 488453 489465 ZNF274 GTRD no Bone Marrow (K562) 108344038
chr19 488453 489792 ZNF274 GTRD no Liver (HepG2) 108344039
chr19 488454 488768 ZNF274 GTRD no Bone Marrow (K562) 108344040
chr19 488454 489963 ZNF274 GTRD no Bone Marrow (K562) 108344041
chr19 488455 489352 ZNF274 GTRD no Bone Marrow (K562) 108344042
chr19 488456 489301 ZNF274 GTRD no Blood (GM12878) 108344043
chr19 488456 489335 ZNF274 GTRD no Bone Marrow (K562) 108344044
chr19 488457 489616 ZNF274 GTRD no Liver (HepG2) 108344045
chr19 488458 488855 ZNF274 GTRD no Blood (GM12878) 108344046
chr19 488459 489324 ZNF274 GTRD no Blood (GM12878) 108344047
chr19 488459 489562 ZNF274 GTRD no Blood (GM12878) 108344048
chr19 488463 488761 ZNF274 GTRD no Liver (HepG2) 108344049
chr19 488464 489506 ZNF274 GTRD no Bone Marrow (K562) 108344050
chr19 488466 489357 ZNF274 GTRD no Liver (HepG2) 108344051
chr19 488467 489786 ZNF274 GTRD no Blood (GM12878) 108344052
chr19 488468 489862 ZNF143 GTRD no Epithelial (MCF-7) 108344053
chr19 488471 489307 ZNF274 GTRD no Cervix (HeLa-S3) 108344054
chr19 488472 489374 ZNF274 GTRD no Blood (GM12878) 108344055
chr19 488473 489502 ZNF274 GTRD no Bone Marrow (K562) 108344056
chr19 488477 489487 ZBTB33 GTRD no Lung (A549) 108344057
chr19 488478 489425 ZNF274 GTRD no Bone Marrow (K562) 108344058
chr19 488480 488827 ZNF274 GTRD no Cervix (HeLa-S3) 108344059
chr19 488480 489215 ZBTB33 GTRD no Lung (A549) 108344060
chr19 488482 488882 ZBTB33 GTRD no Brain (SK-N-SH) 108344061
chr19 488483 489198 ZNF274 GTRD no Bone Marrow (K562) 108344062
chr19 488483 489521 ZNF274 GTRD no Liver (HepG2) 108344063
chr19 488485 489328 ZNF274 GTRD no Blood (GM12878) 108344064
chr19 488489 489345 ZNF143 GTRD no Epithelial (MCF-7) 108344065
chr19 488491 489430 TCF7L2 GTRD no Colon (HCT116) 108344066
chr19 488494 489408 ZBTB33 GTRD no Brain (SK-N-SH) 108344067
chr19 488496 489430 ZBTB33 GTRD no Lung (A549) 108344068
chr19 488497 490047 ZNF274 GTRD no Liver (HepG2) 108344069
chr19 488498 489474 ZNF274 GTRD no Bone Marrow (K562) 108344070
chr19 488499 489726 ZNF274 GTRD no Liver (HepG2) 108344071
chr19 488499 489965 ZNF274 GTRD no Liver (HepG2) 108344072
chr19 488503 488618 ZNF274 GTRD no Bone Marrow (K562) 108344073
chr19 488503 489412 ZNF274 GTRD no Blood (GM12878) 108344074
chr19 488504 488804 ZNF274 GTRD no Blood (GM12878) 108344075
chr19 488509 489967 ZNF274 GTRD no Liver (HepG2) 108344076
chr19 488515 489879 TCF7L2 GTRD no Colon (HCT116) 108344077
chr19 488516 488799 ZNF274 GTRD no Bone Marrow (K562) 108344078
chr19 488517 489877 TCF7L2 GTRD no Colon (HCT116) 108344079
chr19 488519 488795 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108344080
chr19 488522 488962 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108344081
chr19 488526 489892 ZNF274 GTRD no Liver (HepG2) 108344082
chr19 488532 488968 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108344083
chr19 488540 488781 ZNF274 GTRD no Blood (GM12878) 108344084
chr19 488547 489895 ZNF143 GTRD no Epithelial (MCF-7) 108344085
chr19 488551 489611 TCF7L2 GTRD no Colon (HCT116) 108344086
chr19 488564 488660 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108344087
chr19 488564 488684 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108344088
chr19 488579 489303 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108344089
chr19 488579 489404 ZNF274 GTRD no Bone Marrow (K562) 108344090
chr19 488581 489903 ZNF274 GTRD no Bone Marrow (K562) 108344091
chr19 488598 489303 ZNF274 GTRD no Liver (HepG2) 108344092
chr19 488599 488619 RREB1 JASPAR yes 70776122
Genes associated with rs1574520[chr19:488607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 463346 474983 - ODF3L2 ENSG00000181781.5 474983 13624 Adrenal 0.0118525 16702