EnhancerDB
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  3. rs1616259[chr2:30676878]
Enhancers that have rs1616259[chr2:30676878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30672365 30682284 enh53009
Heart Prostate (PC-3) Large Intestine Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs1616259[chr2:30676878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30676869 30676880 HOXA10 JASPAR yes 72771502
chr2 30676870 30676880 EMX1 JASPAR yes 72771503
chr2 30676870 30676880 EMX2 JASPAR yes 72771504
chr2 30676870 30676880 GBX2 JASPAR yes 72771505
chr2 30676870 30676880 HOXB2 JASPAR yes 72771506
chr2 30676870 30676880 HOXB3 JASPAR yes 72771507
chr2 30676870 30676880 LHX6 JASPAR yes 72771508
chr2 30676870 30676880 MEOX1 JASPAR yes 72771509
chr2 30676870 30676880 MEOX2 JASPAR yes 72771510
chr2 30676870 30676880 MNX1 JASPAR yes 72771511
chr2 30676870 30676880 POU6F1 JASPAR yes 72771512
chr2 30676871 30676879 LMX1A JASPAR yes 72771513
chr2 30676871 30676879 LMX1B JASPAR yes 72771514
chr2 30676871 30676879 NKX6-1 JASPAR yes 72771515
chr2 30676871 30676879 NKX6-2 JASPAR yes 72771516
chr2 30676871 30676879 PDX1 JASPAR yes 72771517
chr2 30676871 30676879 VAX1 JASPAR yes 72771518
chr2 30676871 30676879 VAX2 JASPAR yes 72771519
chr2 30676871 30676879 VSX1 JASPAR yes 72771520
Genes associated with rs1616259[chr2:30676878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More