EnhancerDB
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  3. rs1620608[chr17:77891369]
Enhancers that have rs1620608[chr17:77891369]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs1620608[chr17:77891369]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77891264 77891647 ZNF274 GTRD no Cervix (HeLa-S3) 21796622
chr17 77891354 77891369 TFAP2C JASPAR yes 56228529
chr17 77891356 77891371 TFAP2A JASPAR yes 56228531
chr17 77891365 77891765 ZNF274 GTRD no Liver (HepG2) 21796623
Genes associated with rs1620608[chr17:77891369], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 78193498 78227299 + SLC26A11 ENSG00000181045.10 78193498 302129 Thyroid 0.124375 16335