EnhancerDB
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  3. rs1628905[chr1:201276499]
Enhancers that have rs1628905[chr1:201276499]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201263092 201282279 enh12518
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Thyroid Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs1628905[chr1:201276499]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201273925 201278373 ZNF274 GTRD no Cervix (HeLa-S3) 21363917
chr1 201273925 201278373 ZNF274 GTRD no Cervix (HeLa-S3) 107856105
chr1 201273925 201278373 ZNF274 GTRD no Cervix (HeLa-S3) 107856106
chr1 201276494 201276507 NR2F1 JASPAR yes 34489161
chr1 201276495 201276510 NR2C2 JASPAR yes 34489162
chr1 201276497 201276514 RXRA JASPAR yes 34489163
chr1 201276498 201276502 ESR1 TRANSFAC yes 34489164
Genes associated with rs1628905[chr1:201276499], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More