EnhancerDB
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  3. rs16542[chr17:37366429]
Enhancers that have rs16542[chr17:37366429]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 37361244 37366755 enh4391
Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs16542[chr17:37366429]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 37365775 37366435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108253186
chr17 37365932 37366602 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108253188
chr17 37366029 37366549 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108253194
chr17 37366061 37366465 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108253199
chr17 37366426 37366430 LFA1 TRANSFAC yes 54152271
Genes associated with rs16542[chr17:37366429], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More