EnhancerDB
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  3. rs1663184[chr17:77888428]
Enhancers that have rs1663184[chr17:77888428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs1663184[chr17:77888428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77886653 77888804 ZNF143 GTRD no Epithelial (MCF-7) 21796520
chr17 77886974 77888463 ZNF143 GTRD no Epithelial (MCF-7) 21796523
chr17 77886988 77888693 ZNF143 GTRD no Epithelial (MCF-7) 21796524
chr17 77887105 77888711 ZNF143 GTRD no Epithelial (MCF-7) 21796525
chr17 77887158 77888614 ZNF143 GTRD no Epithelial (MCF-7) 21796526
chr17 77887203 77888689 ZNF143 GTRD no Epithelial (MCF-7) 21796528
chr17 77887464 77888490 ZNF143 GTRD no Epithelial (MCF-7) 21796543
chr17 77887525 77888430 TCF7L2 GTRD no Colon (HCT116) 21796550
chr17 77887732 77888429 ZNF274 GTRD no Blood (GM12878) 21796561
chr17 77887903 77888509 ZNF143 GTRD no Epithelial (MCF-7) 21796566
chr17 77888169 77888611 ZNF143 GTRD no Epithelial (MCF-7) 21796570
chr17 77888221 77888650 ZNF143 GTRD no Epithelial (MCF-7) 21796571
chr17 77888373 77888603 ZNF274 GTRD no Blood (GM12878) 21796572
chr17 77888426 77888431 GATA2 JASPAR yes 56228107
Genes associated with rs1663184[chr17:77888428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More