EnhancerDB
  1. Home
  2. SNP
  3. rs1668590[chr15:42253754]
Enhancers that have rs1668590[chr15:42253754]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42246345 42263215 enh3550
Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Heart
Transcript factors that have rs1668590[chr15:42253754]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42253739 42253754 LEF1 JASPAR yes 23010559
chr15 42253740 42253754 TCF7L2 JASPAR yes 23010560
chr15 42253748 42253764 SOX8 JASPAR yes 23010561
Genes associated with rs1668590[chr15:42253754], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More