EnhancerDB
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  3. rs16828495[chr1:42085437]
Enhancers that have rs16828495[chr1:42085437]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs16828495[chr1:42085437]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42085432 42085444 BHLHE23 JASPAR yes 28402082
chr1 42085433 42085443 NEUROD2 JASPAR yes 28402083
chr1 42085433 42085443 OLIG2 JASPAR yes 28402084
Genes associated with rs16828495[chr1:42085437], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More