EnhancerDB
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  3. rs16828507[chr1:42091584]
Enhancers that have rs16828507[chr1:42091584]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs16828507[chr1:42091584]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42091572 42091587 FOXA1 JASPAR yes 28402963
chr1 42091574 42091586 FOXC2 JASPAR yes 28402964
chr1 42091575 42091586 FOXB1 JASPAR yes 28402965
chr1 42091575 42091586 FOXC1 JASPAR yes 28402966
chr1 42091580 42091590 TEAD1 JASPAR yes 28402967
chr1 42091580 42091590 TEAD4 JASPAR yes 28402968
chr1 42091581 42091589 TEAD3 JASPAR yes 28402969
Genes associated with rs16828507[chr1:42091584], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More