EnhancerDB
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  3. rs16828601[chr1:42207360]
Enhancers that have rs16828601[chr1:42207360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42199705 42213143 enh290
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Thymus Stomach
Transcript factors that have rs16828601[chr1:42207360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42207352 42207366 EBF1 JASPAR yes 28416141
chr1 42207353 42207364 EBF1 JASPAR yes 28416142
chr1 42207354 42207365 EBF1 JASPAR yes 28416143
Genes associated with rs16828601[chr1:42207360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More