EnhancerDB
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  3. rs16828927[chr1:42421729]
Enhancers that have rs16828927[chr1:42421729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42414541 42425761 enh26655
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs16828927[chr1:42421729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42421724 42421738 EBF1 JASPAR yes 28441857
chr1 42421725 42421736 EBF1 JASPAR yes 28441858
chr1 42421726 42421732 MZF1 JASPAR yes 28441859
Genes associated with rs16828927[chr1:42421729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More