EnhancerDB
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  3. rs16830292[chr1:25345954]
Enhancers that have rs16830292[chr1:25345954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
chr1 25345809 25346202 vista813
VISTA
Transcript factors that have rs16830292[chr1:25345954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25345953 25345958 SP1 TRANSFAC yes 27554239
chr1 25345953 25345958 SP1 TRANSFAC yes 118252475
chr1 25345954 25345959 SP1 TRANSFAC yes 27554240
chr1 25345954 25345959 SP1 TRANSFAC yes 118252476
Genes associated with rs16830292[chr1:25345954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More