EnhancerDB
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Enhancers that have rs16857338[chr1:232611563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232608845 232614515 enh27613
Astrocyte Neural Stem Cells (H9)
Transcript factors that have rs16857338[chr1:232611563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232611547 232611563 SOX8 JASPAR yes 36162815
chr1 232611559 232611569 HOXC10 JASPAR yes 36162816
chr1 232611559 232611570 HOXA10 JASPAR yes 36162817
chr1 232611559 232611570 HOXC11 JASPAR yes 36162818
chr1 232611560 232611570 GSX2 JASPAR yes 36162819
chr1 232611560 232611570 HOXB3 JASPAR yes 36162820
chr1 232611560 232611570 MEOX2 JASPAR yes 36162821
chr1 232611560 232611570 MNX1 JASPAR yes 36162822
chr1 232611561 232611569 NKX6-1 JASPAR yes 36162823
chr1 232611562 232611576 ATF7 JASPAR yes 36162824
chr1 232611562 232611576 BATF3 JASPAR yes 36162825
Genes associated with rs16857338[chr1:232611563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More