EnhancerDB
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  3. rs16857575[chr1:232669087]
Enhancers that have rs16857575[chr1:232669087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232662605 232677138 enh12784
Prostate (PC-3) Epithelial (MCF-7) Blood (T-cell) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs16857575[chr1:232669087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232669075 232669088 DUXA JASPAR yes 36167911
chr1 232669076 232669087 DUX4 JASPAR yes 36167912
chr1 232669076 232669087 PHOX2A JASPAR yes 36167913
chr1 232669084 232669102 SRF JASPAR yes 36167914
Genes associated with rs16857575[chr1:232669087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More