EnhancerDB
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  3. rs16860727[chr1:183241781]
Enhancers that have rs16860727[chr1:183241781]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183231145 183244789 enh12448
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Breast Thymus Heart
chr1 183241451 183241867 vista4164
VISTA
Transcript factors that have rs16860727[chr1:183241781]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183240831 183245417 TEF1 GTRD no Bone (Osteoblast) 21358783
chr1 183240831 183245417 TEF1 GTRD no Bone (Osteoblast) 21358784
chr1 183240831 183245417 TEF1 GTRD no Bone (Osteoblast) 107850713
chr1 183241047 183241976 ZNF143 GTRD no Epithelial (MCF-7) 107850715
chr1 183241383 183241913 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21358785
chr1 183241383 183241913 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850720
chr1 183241440 183242090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21358786
chr1 183241440 183242090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850721
chr1 183241453 183241813 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21358787
chr1 183241453 183241813 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850722
chr1 183241479 183241809 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21358788
chr1 183241479 183241809 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850723
chr1 183241498 183241974 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21358789
chr1 183241498 183241974 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850724
chr1 183241530 183241850 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21358790
chr1 183241530 183241850 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850725
chr1 183241570 183241910 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21358792
chr1 183241570 183241910 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850727
chr1 183241680 183242184 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21358793
chr1 183241680 183242184 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850728
chr1 183241697 183242173 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21358794
chr1 183241697 183242173 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850729
chr1 183241707 183241951 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21358795
chr1 183241707 183241951 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107850730
chr1 183241715 183241971 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107850731
chr1 183241771 183241792 IRF1 JASPAR yes 33667376
chr1 183241771 183241792 IRF1 JASPAR yes 118411993
chr1 183241773 183241788 IRF9 JASPAR yes 33667377
chr1 183241773 183241788 IRF9 JASPAR yes 118411994
chr1 183241774 183241788 IRF7 JASPAR yes 33667378
chr1 183241774 183241788 IRF7 JASPAR yes 118411995
chr1 183241775 183241790 PRDM1 JASPAR yes 33667379
chr1 183241775 183241790 PRDM1 JASPAR yes 118411996
chr1 183241776 183241788 IRF1 JASPAR yes 33667380
chr1 183241776 183241788 IRF1 JASPAR yes 118411997
chr1 183241777 183241798 IRF1 JASPAR yes 33667381
chr1 183241777 183241798 IRF1 JASPAR yes 118411998
Genes associated with rs16860727[chr1:183241781], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More