EnhancerDB
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  3. rs16875828[chr5:78024111]
Enhancers that have rs16875828[chr5:78024111]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78011825 78026206 enh48957
Prostate (PC-3) Liver (HepG2) Large Intestine Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Thymus Stomach
chr5 78023887 78024125 vista48169
VISTA
Transcript factors that have rs16875828[chr5:78024111]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78023493 78024284 NFIC UCSC Txn Factor no Conserved 108535498
chr5 78023504 78024282 EP300 UCSC Txn Factor no Conserved 108535499
chr5 78023532 78024517 RELA UCSC Txn Factor no Conserved 108535500
chr5 78023571 78024288 RUNX3 UCSC Txn Factor no Conserved 108535501
chr5 78023630 78024196 NFATC1 UCSC Txn Factor no Conserved 108535502
chr5 78023874 78024274 MTA3 UCSC Txn Factor no Conserved 108535503
chr5 78023919 78024186 SPI1 UCSC Txn Factor no Conserved 108535504
chr5 78023919 78024244 FOXM1 UCSC Txn Factor no Conserved 108535505
chr5 78023942 78024207 TCF12 UCSC Txn Factor no Conserved 108535506
chr5 78023946 78024262 EBF1 UCSC Txn Factor no Conserved 108535507
chr5 78023947 78024190 TCF3 UCSC Txn Factor no Conserved 108535508
chr5 78023951 78024230 ATF2 UCSC Txn Factor no Conserved 108535509
chr5 78023962 78024192 PAX5 UCSC Txn Factor no Conserved 108535510
chr5 78023964 78024189 BCL11A UCSC Txn Factor no Conserved 108535511
chr5 78024101 78024116 SCRT1 JASPAR yes 63618347
chr5 78024101 78024116 SCRT1 JASPAR yes 70669890
chr5 78024103 78024123 ESR1 JASPAR yes 63618348
chr5 78024103 78024123 ESR1 JASPAR yes 70669891
chr5 78024107 78024116 ZEB1 JASPAR yes 63618349
chr5 78024107 78024116 ZEB1 JASPAR yes 70669892
Genes associated with rs16875828[chr5:78024111], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More