EnhancerDB
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  3. rs16956050[chr17:6567602]
Enhancers that have rs16956050[chr17:6567602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 6552025 6577412 enh4228
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
Transcript factors that have rs16956050[chr17:6567602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 6566956 6568106 P63 GTRD no Skin (Keratinocyte) 21740874
chr17 6567126 6568243 P63 GTRD no Skin (Keratinocyte) 21740875
chr17 6567137 6568167 P63 GTRD no Skin (Keratinocyte) 21740876
chr17 6567139 6568175 P63 GTRD no Skin (Keratinocyte) 21740877
chr17 6567228 6567874 ZNF274 GTRD no Cervix (HeLa-S3) 21740878
chr17 6567260 6567812 ZNF274 GTRD no Cervix (HeLa-S3) 21740879
chr17 6567405 6567934 TCF7L2 GTRD no Colon (HCT116) 21740880
chr17 6567528 6567920 TCF7L2 GTRD no Colon (HCT116) 21740881
chr17 6567592 6567606 POU1F1 JASPAR yes 52923403
chr17 6567593 6567605 POU3F1 JASPAR yes 52923404
chr17 6567593 6567605 POU3F2 JASPAR yes 52923405
chr17 6567594 6567603 POU3F4 JASPAR yes 52923406
chr17 6567594 6567603 POU5F1B JASPAR yes 52923407
chr17 6567597 6567607 EVX1 JASPAR yes 52923408
chr17 6567597 6567607 EVX2 JASPAR yes 52923409
chr17 6567601 6567616 HNF4A JASPAR yes 52923410
chr17 6567602 6567616 NR2F1 JASPAR yes 52923411
chr17 6567602 6567616 RXRB JASPAR yes 52923412
chr17 6567602 6567616 RXRG JASPAR yes 52923413
chr17 6567602 6567617 HNF4G JASPAR yes 52923414
Genes associated with rs16956050[chr17:6567602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More