EnhancerDB
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  3. rs16958506[chr17:55592948]
Enhancers that have rs16958506[chr17:55592948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55591785 55606415 enh4489
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Liver Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs16958506[chr17:55592948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55592943 55592952 PITX3 JASPAR yes 54963198
chr17 55592943 55592953 GSC2 JASPAR yes 54963199
chr17 55592943 55592953 GSC JASPAR yes 54963200
chr17 55592944 55592952 OTX1 JASPAR yes 54963201
chr17 55592944 55592952 OTX2 JASPAR yes 54963202
chr17 55592944 55592952 RHOXF1 JASPAR yes 54963203
chr17 55592947 55592966 CTCF JASPAR yes 54963204
Genes associated with rs16958506[chr17:55592948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More