EnhancerDB
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  3. rs17035780[chr1:117018562]
Enhancers that have rs17035780[chr1:117018562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17035780[chr1:117018562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117017235 117018800 ZNF143 GTRD no Epithelial (MCF-7) 21332826
chr1 117017235 117018800 ZNF143 GTRD no Epithelial (MCF-7) 107824256
chr1 117017643 117018745 ZNF143 GTRD no Epithelial (MCF-7) 21332838
chr1 117017643 117018745 ZNF143 GTRD no Epithelial (MCF-7) 107824268
chr1 117017649 117019107 ZNF143 GTRD no Epithelial (MCF-7) 21332839
chr1 117017649 117019107 ZNF143 GTRD no Epithelial (MCF-7) 107824269
chr1 117017710 117018618 ZNF143 GTRD no Epithelial (MCF-7) 21332849
chr1 117017710 117018618 ZNF143 GTRD no Epithelial (MCF-7) 107824278
chr1 117017712 117018763 ZNF143 GTRD no Epithelial (MCF-7) 21332850
chr1 117017712 117018763 ZNF143 GTRD no Epithelial (MCF-7) 107824279
chr1 117018542 117018562 ESR1 JASPAR yes 31810908
chr1 117018545 117018563 ESR2 JASPAR yes 31810909
chr1 117018546 117018563 ESR1 JASPAR yes 31810910
chr1 117018547 117018562 ESR2 JASPAR yes 31810911
chr1 117018548 117018562 TLX1 JASPAR yes 31810912
chr1 117018554 117018566 YY1 JASPAR yes 31810913
chr1 117018557 117018563 YY1 JASPAR yes 31810914
Genes associated with rs17035780[chr1:117018562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More