EnhancerDB
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  3. rs17035809[chr1:117021188]
Enhancers that have rs17035809[chr1:117021188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17035809[chr1:117021188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117020380 117021414 ZNF143 GTRD no Epithelial (MCF-7) 21332911
chr1 117020437 117021361 ZNF143 GTRD no Epithelial (MCF-7) 21332912
chr1 117020526 117021470 ZNF274 GTRD no Bone Marrow (K562) 21332913
chr1 117020530 117021386 ZNF143 GTRD no Epithelial (MCF-7) 21332914
chr1 117020754 117021248 ZNF274 GTRD no Bone Marrow (K562) 21332915
chr1 117021176 117021193 RXRA JASPAR yes 31811308
chr1 117021178 117021188 TFAP4 JASPAR yes 31811309
Genes associated with rs17035809[chr1:117021188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More