EnhancerDB
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  3. rs17035839[chr1:117029371]
Enhancers that have rs17035839[chr1:117029371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17035839[chr1:117029371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117029067 117029543 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332994
chr1 117029073 117030978 ZNF274 GTRD no Bone Marrow (K562) 21332995
chr1 117029073 117030978 ZNF274 GTRD no Bone Marrow (K562) 107824318
chr1 117029104 117029434 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332996
chr1 117029118 117029458 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332997
chr1 117029123 117029403 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332998
chr1 117029125 117029445 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332999
chr1 117029133 117029397 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333000
chr1 117029153 117029409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333001
chr1 117029168 117029452 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333002
chr1 117029183 117029439 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333003
chr1 117029347 117030407 ZNF274 GTRD no Bone Marrow (K562) 21333004
chr1 117029370 117029375 TFAP2A TRANSFAC yes 31812519
chr1 117029370 117029376 MZF1 JASPAR yes 31812520
Genes associated with rs17035839[chr1:117029371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More