EnhancerDB
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  3. rs1704408[chr15:42252179]
Enhancers that have rs1704408[chr15:42252179]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42246345 42263215 enh3550
Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Heart
Transcript factors that have rs1704408[chr15:42252179]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42252159 42252180 IRF1 JASPAR yes 23010253
chr15 42252160 42252181 IRF1 JASPAR yes 23010255
chr15 42252162 42252183 IRF1 JASPAR yes 23010258
chr15 42252176 42252192 SOX8 JASPAR yes 23010260
Genes associated with rs1704408[chr15:42252179], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More