EnhancerDB
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  3. rs17364300[chr1:42141252]
Enhancers that have rs17364300[chr1:42141252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr1 42141163 42141343 vista1342
VISTA
Transcript factors that have rs17364300[chr1:42141252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42141246 42141256 RELA JASPAR yes 28408663
chr1 42141246 42141256 REL JASPAR yes 28408664
chr1 42141246 42141256 RELA JASPAR yes 118279336
chr1 42141246 42141256 REL JASPAR yes 118279337
Genes associated with rs17364300[chr1:42141252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More