EnhancerDB
  1. Home
  2. SNP
  3. rs17372813[chr1:42139393]
Enhancers that have rs17372813[chr1:42139393]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17372813[chr1:42139393]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42139381 42139395 POU4F1 JASPAR yes 28408435
chr1 42139382 42139396 POU4F1 JASPAR yes 28408436
chr1 42139382 42139398 POU4F3 JASPAR yes 28408437
Genes associated with rs17372813[chr1:42139393], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More