EnhancerDB
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  3. rs1754140[chr1:43472313]
Enhancers that have rs1754140[chr1:43472313]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs1754140[chr1:43472313]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43471709 43472739 ZNF274 GTRD no Cervix (HeLa-S3) 107803013
chr1 43471812 43473352 ZBTB33 GTRD no Brain (SK-N-SH) 107803014
chr1 43472302 43472314 GLI2 JASPAR yes 28477192
chr1 43472307 43472325 TP63 JASPAR yes 28477193
chr1 43472311 43472322 GCM1 JASPAR yes 28477194
Genes associated with rs1754140[chr1:43472313], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 44457031 44462200 + CCDC24 ENSG00000159214.8 44457031 984718 Pancreas 0.225337 614